MolNFT v1 · #57128 · DNA
The crystal structure of the DNA decamer D(GGCAATTGCG) contains both major and minor groove binding G.(G.C) triplets
335D · DNA (5'-D(*GP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3'): “The crystal structure of the DNA decamer D(GGCAATTGCG) contains both major and minor groove binding G.(G.C)…”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #57128 on GenesisL1: 3D…
- PDB
- 335D
- Type
- DNA
- Length
- 10 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*GP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3')
- Ligands
- MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*GP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3') | dna | 10 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 335D · The crystal structure of the DNA decamer D(GGCAATTGCG) contains both major and minor… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 335D · PDBe 335D
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