MolNFT v1 · #57106 · RNA
Crystal structure of an alternating octamer R(GUAUGUA)D(C) with adjacent G-U wobble pairs
315D · DNA/RNA (5'-R(*GP*UP*AP*UP*GP*UP*AP*)-D(*C)-3'): “Crystal structure of an alternating octamer R(GUAUGUA)D(C) with adjacent G-U wobble pairs”. X-ray diffraction. MolNFT v1 #57106 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 315D
- Type
- RNA
- Length
- 16 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA/RNA (5'-R(*GP*UP*AP*UP*GP*UP*AP*)-D(*C)-3')
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA/RNA (5'-R(*GP*UP*AP*UP*GP*UP*AP*)-D(*C)-3') | rna | 8 | — | — |
Interfaces
1 interface between chains.
- A–B · 396 Ų buried · 25 hydrogen bonds · nucleic-nucleic
Compared structures
- 315D · Crystal structure of an alternating octamer R(GUAUGUA)D(C) with adjacent G-U wobble pairs · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 315D · PDBe 315D
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