MolNFT v1 · #57024 · protein

Crystal structure of cytochrome C555 from aquifex aeolicus

2ZXY · Cytochrome C552: “Crystal structure of cytochrome C555 from aquifex aeolicus”. X-ray diffraction, 1 ligand (HEC), 1 pocket (best druggability 0.77). MolNFT v1 #57024 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2ZXY
Type: protein
Length: 86 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cytochrome C552
UniProt: O67504
Ligands: HEC
Pockets: 1 · best druggability 0.77

Structure

x-ray diffraction · 1 distinct chain · 62% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cytochrome C552	protein	86	62% helix, 0% strand	O67504

Ligands and binding sites

HEC · Heme C · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	216	0.77	0.90	32	HEC

Modifications

Observed in the structure: 2 cofactor (heme c attachment).

Compared structures

2ZXY · Crystal Structure of Cytochrome c555 from Aquifex aeolicus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O67504
Elsewhere: RCSB PDB 2ZXY · PDBe 2ZXY · UniProt O67504

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.