MolNFT v1 · #5691 · protein
Structure and topological symmetry of the glyphosphate 5-enol- pyruvylshikimate-3-phosphate synthase: a distinctive protein fold
1EPS · 5-enol-pyruvyl-3-phosphate synthase: “Structure and topological symmetry of the glyphosphate 5-enol- pyruvylshikimate-3-phosphate synthase: a…”. X-ray diffraction, 2 pockets (best druggability 0.45). MolNFT v1 #5691 on GenesisL1: 3D…
- PDB
- 1EPS
- Type
- protein
- Length
- 427 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5-enol-pyruvyl-3-phosphate synthase
- EC
- 2.5.1.19
- UniProt
- P0A6D3
- Pockets
- 2 · best druggability 0.45
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5-enol-pyruvyl-3-phosphate synthase (EC 2.5.1.19) | protein | 427 | 0% helix, 0% strand | P0A6D3 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 183 | 0.45 | 0.72 | 47 | empty |
| 2 | 98 | 0.36 | 0.73 | 21 | empty |
Compared structures
- 1EPS · Structure and topological symmetry of the glyphosphate… · the same entry in another collection · chain A against A, TM-score 1.00
- P0A6D3 · AlphaFold monomer V2.0 prediction for 3-phosphoshikimate 1-carboxyvinyltransferase… · a predicted model of the same protein · chain A against A, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A6D3
- Elsewhere: RCSB PDB 1EPS · PDBe 1EPS · UniProt P0A6D3
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