MolNFT v1 · #56709 · protein
Crystal structure of metallo-beta-lactamase family protein TTHA1429 from thermus thermophilus HB8
2ZO4: “Crystal structure of metallo-beta-lactamase family protein TTHA1429 from thermus thermophilus HB8”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.74). MolNFT v1 #56709 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2ZO4
- Type
- protein
- Length
- 301 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Metallo-beta-lactamase family protein
- EC
- 3.-.-.-
- UniProt
- Q5SIE5
- Ligands
- ZN
- Pockets
- 1 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Metallo-beta-lactamase family protein (EC 3.-.-.-) | protein | 301 | 37% helix, 23% strand | Q5SIE5 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 451 | 0.74 | 0.83 | 47 | empty |
Compared structures
- 2ZO4 · Crystal structure of metallo-beta-lactamase family protein TTHA1429 from Thermus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SIE5
- Elsewhere: RCSB PDB 2ZO4 · PDBe 2ZO4 · UniProt Q5SIE5
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