MolNFT v1 · #55556 · protein
Salmonella enterica sada 823-947 fused to a GCN4 adaptor (SADAK5)
2YNZ · General control protein GCN4, putative inner membrane…: “Salmonella enterica sada 823-947 fused to a GCN4 adaptor (SADAK5)”. X-ray diffraction, 1 ligand (NO3). MolNFT v1 #55556 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 2YNZ
- Type
- protein
- Length
- 327 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- General control protein GCN4, putative inner membrane protein
- UniProt
- P03069, Q8ZL64
- Ligands
- NO3
Structure
x-ray diffraction · 1 distinct chain · 61% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | General control protein GCN4, putative inner membrane protein | protein | 109 | 61% helix, 14% strand | P03069, Q8ZL64 |
Ligands and binding sites
- NO3 · Nitrate ion · ion · 4 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
3 interfaces between chains.
- A–B · 2337 Ų buried · 30 hydrogen bonds · protein-protein
- B–C · 2285 Ų buried · 25 hydrogen bonds · protein-protein
- A–C · 2243 Ų buried · 31 hydrogen bonds · protein-protein
Compared structures
- 2YNZ · Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5) · the same entry in another collection · chain A against A, TM-score 1.00
- Q8ZL64 · AlphaFold monomer V2.0 prediction for autotransporter adhesin sada (Q8ZL64) · a predicted model of the same protein · chain A against A, TM-score 0.56
- P03069 · AlphaFold monomer V2.0 prediction for general control transcription factor GCN4 (P03069) · a predicted model of the same protein · chain C against A, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03069
- Every structure of UniProt Q8ZL64
- Elsewhere: RCSB PDB 2YNZ · PDBe 2YNZ · UniProt P03069 · UniProt Q8ZL64
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