MolNFT v1 · #55555 · protein
Salmonella enterica sada 255-302 fused to GCN4 adaptors (SADAK1)
2YNY · General control protein GCN4, putative inner membrane…: “Salmonella enterica sada 255-302 fused to GCN4 adaptors (SADAK1)”. X-ray diffraction. MolNFT v1 #55555 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2YNY
- Type
- protein
- Length
- 315 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- General control protein GCN4, putative inner membrane protein
- UniProt
- P03069, Q8ZL64
Structure
x-ray diffraction · 3 distinct chains · 73% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | General control protein GCN4, putative inner membrane protein | protein | 106 | 73% helix, 8% strand | P03069, Q8ZL64 |
| B | General control protein GCN4, putative inner membrane protein | protein | 104 | 73% helix, 10% strand | P03069, Q8ZL64 |
| C | General control protein GCN4, putative inner membrane protein | protein | 105 | 73% helix, 8% strand | P03069, Q8ZL64 |
Interfaces
3 interfaces between chains.
- A–C · 1875 Ų buried · 12 hydrogen bonds · protein-protein
- B–C · 1854 Ų buried · 11 hydrogen bonds · protein-protein
- A–B · 1715 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 2YNY · Salmonella enterica SadA 255-302 fused to GCN4 adaptors (SadAK1) · the same entry in another collection · chain A against A, TM-score 1.00
- Q8ZL64 · AlphaFold monomer V2.0 prediction for autotransporter adhesin sada (Q8ZL64) · a predicted model of the same protein · chain A against A, TM-score 0.62
- P03069 · AlphaFold monomer V2.0 prediction for general control transcription factor GCN4 (P03069) · a predicted model of the same protein · chain C against A, TM-score 0.42
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03069
- Every structure of UniProt Q8ZL64
- Elsewhere: RCSB PDB 2YNY · PDBe 2YNY · UniProt P03069 · UniProt Q8ZL64
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