MolNFT v1 · #5481 · protein
Crystal structure of unliganded mura (TYPE2)
1EJC · Udp-N-acetylglucosamine enolpyruvyltransferase: “Crystal structure of unliganded mura (TYPE2)”. X-ray diffraction, 1 ligand (PO4), 2 pockets (best druggability 0.68). MolNFT v1 #5481 on GenesisL1: 3D structure, binding sites and…
- PDB
- 1EJC
- Type
- protein
- Length
- 419 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Udp-N-acetylglucosamine enolpyruvyltransferase
- EC
- 2.5.1.7
- UniProt
- P33038
- Ligands
- PO4
- Pockets
- 2 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylglucosamine enolpyruvyltransferase (EC 2.5.1.7) | protein | 419 | 34% helix, 27% strand | P33038 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 714 | 0.68 | 0.76 | 62 | GOL |
| 2 | 94 | 0.39 | 0.77 | 18 | empty |
Modifications
Observed in the structure: 1 modified (nonstandard).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33038
- Elsewhere: RCSB PDB 1EJC · PDBe 1EJC · UniProt P33038
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