MolNFT v1 · #54766 · protein

Crystal structure of cstf-50 homodimerization domain

2XZ2 · Cstf-50, isoform B: “Crystal structure of cstf-50 homodimerization domain”. X-ray diffraction, 1 ligand (NA), 1 pocket (best druggability 0.39). MolNFT v1 #54766 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2XZ2
Type: protein
Length: 66 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cstf-50, isoform B
UniProt: Q8IMG2
Ligands: NA
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 68% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cstf-50, isoform B	protein	66	68% helix, 0% strand	Q8IMG2

Ligands and binding sites

NA · Sodium ion · metal · 4 copies · chains A
PEG · Di(hydroxyethyl)ether · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	100	0.39	0.76	19	empty

Compared structures

2XZ2 · Crystal structure of CstF-50 homodimerization domain · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8IMG2
Elsewhere: RCSB PDB 2XZ2 · PDBe 2XZ2 · UniProt Q8IMG2

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