MolNFT v1 · #54740 · protein

Crystal structure of NCAM2 igiv-FN3I

2XYC · Neural cell adhesion molecule 2: “Crystal structure of NCAM2 igiv-FN3I”. X-ray diffraction, 2 ligands (NAG, PO4). MolNFT v1 #54740 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2XYC
Type: protein
Length: 291 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Neural cell adhesion molecule 2
UniProt: O15394
Ligands: NAG, PO4

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 55% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Neural cell adhesion molecule 2	protein	291	2% helix, 55% strand	O15394

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A
PO4 · Phosphate ion · ion · 3 copies · chains A
EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 glycan, 2 disulfide (N-glycosylation, disulfide).

Compared structures

2XYC · Crystal structure of NCAM2 igiv-FN3I · the same entry in another collection · chain A against A, TM-score 1.00
O15394 · AlphaFold monomer V2.0 prediction for neural cell adhesion molecule 2 (O15394) · a predicted model of the same protein · chain A against A, TM-score 0.66

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O15394
Elsewhere: RCSB PDB 2XYC · PDBe 2XYC · UniProt O15394

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.