MolNFT v1 · #5468 · protein

Ftsj RNA methyltransferase complexed with S-adenosylmethionine

1EIZ: “Ftsj RNA methyltransferase complexed with S-adenosylmethionine”. X-ray diffraction, 1 ligand (SAM), 1 pocket (best druggability 0.52). MolNFT v1 #5468 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1EIZ
Type: protein
Length: 180 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ftsj
EC: 2.1.1.-
UniProt: P28692
Ligands: SAM
Pockets: 1 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ftsj (EC 2.1.1.-)	protein	180	37% helix, 28% strand	P28692

Ligands and binding sites

SAM · S-adenosylmethionine · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	220	0.52	0.76	42	SAM

Compared structures

1EIZ · Ftsj RNA methyltransferase complexed with S-adenosylmethionine · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P28692
Elsewhere: RCSB PDB 1EIZ · PDBe 1EIZ · UniProt P28692

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