MolNFT v1 · #53833 · protein
Crystal structure of trehalose synthase tret from P. horikoshi
2X6Q · Trehalose-synthase tret: “Crystal structure of trehalose synthase tret from P. horikoshi”. X-ray diffraction, 4 pockets (best druggability 0.75). MolNFT v1 #53833 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2X6Q
- Type
- protein
- Length
- 817 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Trehalose-synthase tret
- UniProt
- O58762
- Pockets
- 4 · best druggability 0.75
Structure
x-ray diffraction · 2 distinct chains · 48% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trehalose-synthase tret | protein | 408 | 48% helix, 15% strand | O58762 |
| B | Trehalose-synthase tret | protein | 409 | 48% helix, 15% strand | O58762 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 912 | 0.75 | 0.78 | 76 | empty |
| 2 | 1070 | 0.74 | 0.77 | 70 | empty |
| 3 | 1020 | 0.73 | 0.76 | 69 | empty |
| 4 | 59 | 0.30 | 0.74 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 304 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O58762
- Elsewhere: RCSB PDB 2X6Q · PDBe 2X6Q · UniProt O58762
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.