MolNFT v1 · #53164 · protein
Crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae TIGR4 ( SP4GH98) in its native form.
2WMF · Fucolectin-related protein: “Crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae…”. X-ray diffraction, 4 pockets (best druggability 0.60). MolNFT v1 #53164 on GenesisL1: 3D…
- PDB
- 2WMF
- Type
- protein
- Length
- 555 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fucolectin-related protein
- UniProt
- Q97N96
- Pockets
- 4 · best druggability 0.60
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fucolectin-related protein | protein | 555 | 33% helix, 25% strand | Q97N96 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 246 | 0.60 | 0.79 | 27 | empty |
| 2 | 68 | 0.34 | 0.76 | 21 | empty |
| 3 | 60 | 0.33 | 0.76 | 15 | empty |
| 4 | 71 | 0.32 | 0.74 | 15 | empty |
Compared structures
- 2WMF · Crystal structure of the catalytic module of a family 98 glycoside hydrolase from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q97N96
- Elsewhere: RCSB PDB 2WMF · PDBe 2WMF · UniProt Q97N96
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