MolNFT v1 · #530 · protein
Crystal structure of calsequestrin from rabbit skeletal muscle sarcoplasmic reticulum at 2.4 a resolution
1A8Y: “Crystal structure of calsequestrin from rabbit skeletal muscle sarcoplasmic reticulum at 2.4 a resolution”. X-ray diffraction, 6 pockets (best druggability 0.57). MolNFT v1 #530 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 1A8Y
- Type
- protein
- Length
- 338 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Calsequestrin
- UniProt
- P07221
- Pockets
- 6 · best druggability 0.57
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Calsequestrin | protein | 338 | 38% helix, 20% strand | P07221 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 62 | 0.57 | 0.89 | 17 | empty |
| 2 | 168 | 0.49 | 0.77 | 22 | empty |
| 3 | 109 | 0.47 | 0.79 | 18 | empty |
| 4 | 68 | 0.32 | 0.75 | 13 | empty |
| 5 | 60 | 0.28 | 0.73 | 13 | empty |
Compared structures
- 1A8Y · Crystal structure of calsequestrin from rabbit skeletal muscle sarcoplasmic reticulum at… · the same entry in another collection · chain A against A, TM-score 1.00
- P07221 · AlphaFold monomer V2.0 prediction for calsequestrin-1 (P07221) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07221
- Elsewhere: RCSB PDB 1A8Y · PDBe 1A8Y · UniProt P07221
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