MolNFT v1 · #5290 · protein
Refined X-ray structures of haloalkane dehalogenase at pH 6.2 and pH 8.2 and implications for the reaction mechanism
1EDE: “Refined X-ray structures of haloalkane dehalogenase at pH 6.2 and pH 8.2 and implications for the reaction…”. X-ray diffraction, 1 pocket (best druggability 0.36). MolNFT v1 #5290 on GenesisL1: 3D structure, binding sites and…
- PDB
- 1EDE
- Type
- protein
- Length
- 310 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Haloalkane dehalogenase
- EC
- 3.8.1.5
- UniProt
- P22643
- Pockets
- 1 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Haloalkane dehalogenase (EC 3.8.1.5) | protein | 310 | 42% helix, 14% strand | P22643 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.36 | 0.79 | 16 | empty |
Compared structures
- 1EDE · Refined X-ray structures of haloalkane dehalogenase at pH 6.2 and pH 8.2 and implications… · the same entry in another collection · chain A against A, TM-score 1.00
- P22643 · AlphaFold monomer V2.0 prediction for haloalkane dehalogenase (P22643) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22643
- Elsewhere: RCSB PDB 1EDE · PDBe 1EDE · UniProt P22643
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