MolNFT v1 · #52787 · protein
PT26-6P
2WB7: “PT26-6P”. X-ray diffraction, 9 pockets (best druggability 0.77). MolNFT v1 #52787 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2WB7
- Type
- protein
- Length
- 1,050 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- PT26-6P
- Pockets
- 9 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | PT26-6P | protein | 525 | 33% helix, 35% strand | — |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 848 | 0.77 | 0.81 | 77 | empty |
| 2 | 143 | 0.42 | 0.75 | 35 | empty |
| 3 | 127 | 0.42 | 0.76 | 24 | empty |
| 4 | 127 | 0.40 | 0.75 | 17 | empty |
| 5 | 74 | 0.36 | 0.77 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 783 Ų buried · 14 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 22 modified, 2 disulfide (engineered, disulfide).
Compared structures
- 2WB7 · pT26-6p · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2WB7 · PDBe 2WB7
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