MolNFT v1 · #5225 · protein

Bacillus stearothermophilus yhfr

1EBB · Phosphatase: “Bacillus stearothermophilus yhfr”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.64). MolNFT v1 #5225 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1EBB
Type: protein
Length: 202 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phosphatase
UniProt: Q9ALU0
Ligands: SO4
Pockets: 1 · best druggability 0.64

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phosphatase	protein	202	41% helix, 20% strand	Q9ALU0

Ligands and binding sites

SO4 · Sulfate ion · ion · 5 copies · chains A
GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	300	0.64	0.80	34	GOL

Compared structures

1EBB · Bacillus stearothermophilus YhfR · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9ALU0
Elsewhere: RCSB PDB 1EBB · PDBe 1EBB · UniProt Q9ALU0

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.