MolNFT v1 · #52210 · protein
Structure of psbp protein from spinacia oleracea at 1.98 a resolution
2VU4 · Oxygen-evolving enhancer protein 2: “Structure of psbp protein from spinacia oleracea at 1.98 a resolution”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.30). MolNFT v1 #52210 on GenesisL1: 3D structure, binding…
- PDB
- 2VU4
- Type
- protein
- Length
- 148 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Oxygen-evolving enhancer protein 2
- UniProt
- P12302
- Ligands
- ZN
- Pockets
- 1 · best druggability 0.30
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Oxygen-evolving enhancer protein 2 | protein | 148 | 22% helix, 45% strand | P12302 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.30 | 0.76 | 17 | empty |
Compared structures
- 2VU4 · Structure of PsbP protein from Spinacia oleracea at 1.98 A resolution · the same entry in another collection · chain A against A, TM-score 1.00
- P12302 · AlphaFold monomer V2.0 prediction for oxygen-evolving enhancer protein 2, chloroplastic… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12302
- Elsewhere: RCSB PDB 2VU4 · PDBe 2VU4 · UniProt P12302
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