MolNFT v1 · #52149 · protein
Crystal structure of chir-AB1
2VSD · Chir AB1: “Crystal structure of chir-AB1”. X-ray diffraction, 2 ligands (NAG, BMA). MolNFT v1 #52149 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2VSD
- Type
- protein
- Length
- 93 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chir AB1
- UniProt
- Q5ZJ90
- Ligands
- NAG, BMA
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 54% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chir AB1 | protein | 93 | 3% helix, 54% strand | Q5ZJ90 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
- BMA · beta-D-mannopyranose · sugar · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide, 1 glycan (disulfide, N-glycosylation).
Compared structures
- 2VSD · crystal structure of CHIR-AB1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZJ90
- Elsewhere: RCSB PDB 2VSD · PDBe 2VSD · UniProt Q5ZJ90
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