MolNFT v1 · #51059 · protein
Crystal structure of the nasturtium seedling mutant xyloglucanase isoform NXG1-delta-yniig
2UWB · Cellulase: “Crystal structure of the nasturtium seedling mutant xyloglucanase isoform NXG1-delta-yniig”. X-ray diffraction, 6 pockets (best druggability 0.43). MolNFT v1 #51059 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 2UWB
- Type
- protein
- Length
- 534 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cellulase
- EC
- 3.2.1.151, 3.2.1.4
- UniProt
- Q07524
- Pockets
- 6 · best druggability 0.43
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Cellulase (EC 3.2.1.151, 3.2.1.4) | protein | 267 | 15% helix, 42% strand | Q07524 |
Pockets
6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.43 | 0.77 | 16 | empty |
| 2 | 101 | 0.40 | 0.76 | 14 | empty |
| 3 | 52 | 0.33 | 0.78 | 14 | empty |
| 4 | 79 | 0.32 | 0.74 | 21 | empty |
| 5 | 56 | 0.32 | 0.77 | 15 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 2UWB · Crystal structure of the Nasturtium seedling mutant xyloglucanase isoform NXG1-delta-YNIIG · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q07524
- Elsewhere: RCSB PDB 2UWB · PDBe 2UWB · UniProt Q07524
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