MolNFT v1 · #50690 · RNA
Quadruplex structure of an RNA aptamer against bovine prion protein
2RQJ · RNA (5'-R(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3'): “Quadruplex structure of an RNA aptamer against bovine prion protein”. Solution nmr. MolNFT v1 #50690 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2RQJ
- Type
- RNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'-R(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3')
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | RNA (5'-R(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3') | rna | 12 | — | — |
Interfaces
1 interface between chains.
- A–B · 670 Ų buried · 30 hydrogen bonds · nucleic-nucleic
Compared structures
- 2RQJ · Quadruplex structure of an RNA aptamer against bovine prion protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2RQJ · PDBe 2RQJ
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