MolNFT v1 · #50611 · protein

Solution structure of the N-terminal sap domain of sumo E3 ligases from oryza sativa

2RNO · Putative DNA-binding protein: “Solution structure of the N-terminal sap domain of sumo E3 ligases from oryza sativa”. Solution nmr, 1 pocket (best druggability 0.61). MolNFT v1 #50611 on GenesisL1: 3D structure, binding sites and…

PDB: 2RNO
Type: protein
Length: 110 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative DNA-binding protein
UniProt: Q6L4L4
Pockets: 1 · best druggability 0.61

Structure

solution nmr · 1 distinct chain · 52% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative DNA-binding protein	protein	110	52% helix, 0% strand	Q6L4L4

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	322	0.61	0.78	36	empty

Compared structures

2RNO · Solution Structure of the N-terminal SAP Domain of SUMO E3 Ligases from Oryza sativa · the same entry in another collection · chain A against A, TM-score 1.00
Q6L4L4 · AlphaFold monomer V2.0 prediction for E3 sumo-protein ligase SIZ1 (Q6L4L4) · a predicted model of the same protein · chain A against A, TM-score 0.53

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6L4L4
Elsewhere: RCSB PDB 2RNO · PDBe 2RNO · UniProt Q6L4L4

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.