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MolNFT v1 · #50360 · protein

Crystal structure of E. COLI wrba apoprotein

2RG1 · Flavoprotein wrba: “Crystal structure of E. COLI wrba apoprotein”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #50360 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2RG1
Type
protein
Length
334 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Flavoprotein wrba
EC
1.6.5.2
UniProt
P0A8G6
Ligands
CL

Structure

x-ray diffraction · 2 distinct chains · 41% helix, 22% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AFlavoprotein wrba (EC 1.6.5.2)protein16840% helix, 21% strandP0A8G6
BFlavoprotein wrba (EC 1.6.5.2)protein16641% helix, 23% strandP0A8G6

Ligands and binding sites

  • CL · Chloride ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 1138 Ų buried · 11 hydrogen bonds · protein-protein

Compared structures

  • 2RG1 · Crystal structure of E. coli WrbA apoprotein · the same entry in another collection · chain A against A, TM-score 1.00
  • P0A8G6 · AlphaFold monomer V2.0 prediction for NAD(P)H dehydrogenase (quinone) (P0A8G6) · a predicted model of the same protein · chain A against A, TM-score 0.99

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