MolNFT v1 · #5025 · protein
Beta ketoacyl acyl carrier protein synthase II (kasii) from synechocystis sp.
1E5M: “Beta ketoacyl acyl carrier protein synthase II (kasii) from synechocystis sp.”. X-ray diffraction, 2 pockets (best druggability 0.61). MolNFT v1 #5025 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1E5M
- Type
- protein
- Length
- 411 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta ketoacyl acyl carrier protein synthase II
- EC
- 2.3.1.41
- UniProt
- P73283
- Pockets
- 2 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta ketoacyl acyl carrier protein synthase II (EC 2.3.1.41) | protein | 411 | 40% helix, 21% strand | P73283 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 104 | 0.61 | 0.87 | 32 | empty |
| 2 | 93 | 0.37 | 0.76 | 26 | empty |
Compared structures
- 1E5M · Beta ketoacyl acyl carrier protein synthase II (KASII) from Synechocystis sp. · the same entry in another collection · chain A against A, TM-score 1.00
- P73283 · AlphaFold monomer V2.0 prediction for 3-oxoacyl-[acyl-carrier- protein] synthase 2… · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P73283
- Elsewhere: RCSB PDB 1E5M · PDBe 1E5M · UniProt P73283
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