MolNFT v1 · #50206 · protein

Crystal structure of hypothetical PROTEIN(ST0493) from sulfolobus tokodaii

2RBG · Putative uncharacterized protein ST0493: “Crystal structure of hypothetical PROTEIN(ST0493) from sulfolobus tokodaii”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.40). MolNFT v1 #50206 on GenesisL1: 3D…

PDB: 2RBG
Type: protein
Length: 248 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative uncharacterized protein ST0493
UniProt: Q975B5
Ligands: SO4
Pockets: 2 · best druggability 0.40

Structure

x-ray diffraction · 1 distinct chain · 47% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Putative uncharacterized protein ST0493	protein	124	47% helix, 25% strand	Q975B5

Ligands and binding sites

SO4 · Sulfate ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	72	0.40	0.79	15	empty
2	68	0.29	0.73	18	empty

Interfaces

1 interface between chains.

A–B · 455 Å² buried · 13 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide, 2 modified (disulfide, engineered).

Compared structures

2RBG · Crystal structure of hypothetical protein(ST0493) from sulfolobus tokodaii · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q975B5
Elsewhere: RCSB PDB 2RBG · PDBe 2RBG · UniProt Q975B5

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