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MolNFT v1 · #50101 · protein

The structure of transporter associated domain CORC_HLYC from a xylella fastidiosa TEMECULA1 hemolysin in complex with mg++ and mn++

2R8D: “The structure of transporter associated domain CORC_HLYC from a xylella fastidiosa TEMECULA1 hemolysin in…”. X-ray diffraction, 2 ligands (MN, MG). MolNFT v1 #50101 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2R8D
Type
protein
Length
79 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Hemolysin
UniProt
Q87DZ3
Ligands
MN, MG

Structure

x-ray diffraction · 1 distinct chain · 22% helix, 39% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AHemolysinprotein7922% helix, 39% strandQ87DZ3

Ligands and binding sites

  • MN · Manganese (II) ion · metal · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 modified (engineered, methylation).

Compared structures

  • 2R8D · The structure of transporter associated domain CorC_HlyC from a Xylella fastidiosa… · the same entry in another collection · chain A against A, TM-score 1.00

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