MolNFT v1 · #50046 · protein
Crystal structure of gab protein
2R6S: “Crystal structure of gab protein”. X-ray diffraction, 3 ligands (BCN, FE2, SO4), 2 pockets (best druggability 0.74). MolNFT v1 #50046 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2R6S
- Type
- protein
- Length
- 299 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gab protein
- UniProt
- A2UG88
- Ligands
- BCN, FE2, SO4
- Pockets
- 2 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Gab protein | protein | 299 | 28% helix, 29% strand | A2UG88 |
Ligands and binding sites
- BCN · Bicine · ligand · chains A
- FE2 · Fe (II) ion · metal · chains A
- SO4 · Sulfate ion · ion · 3 copies · chains A
- GOL · Glycerol · additive · 21 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 660 | 0.74 | 0.80 | 63 | FE2, SO4, BCN, GOL |
| 2 | 100 | 0.35 | 0.73 | 16 | empty |
Modifications
Observed in the structure: 1 covalent (additive adduct).
Compared structures
- 2R6S · Crystal structure of Gab protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A2UG88
- Elsewhere: RCSB PDB 2R6S · PDBe 2R6S · UniProt A2UG88
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