MolNFT v1 · #49797 · protein
Monoclinic mimivirus capping enzyme triphosphatase.
2QZE · Probable mRNA-capping enzyme: “Monoclinic mimivirus capping enzyme triphosphatase.”. X-ray diffraction, 2 pockets (best druggability 0.62). MolNFT v1 #49797 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2QZE
- Type
- protein
- Length
- 442 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable mRNA-capping enzyme
- UniProt
- Q5UQX1
- Pockets
- 2 · best druggability 0.62
Structure
x-ray diffraction · 2 distinct chains · 31% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable mRNA-capping enzyme | protein | 220 | 31% helix, 35% strand | Q5UQX1 |
| B | Probable mRNA-capping enzyme | protein | 222 | 32% helix, 38% strand | Q5UQX1 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 523 | 0.62 | 0.75 | 62 | empty |
| 2 | 374 | 0.62 | 0.78 | 45 | empty |
Interfaces
1 interface between chains.
- A–B · 334 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 2QZE · Monoclinic Mimivirus Capping Enzyme Triphosphatase. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5UQX1
- Elsewhere: RCSB PDB 2QZE · PDBe 2QZE · UniProt Q5UQX1
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