MolNFT v1 · #49291 · protein

Crystal structure of URM1

2QJL · Ubiquitin-related modifier 1: “Crystal structure of URM1”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #49291 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2QJL
Type: protein
Length: 99 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ubiquitin-related modifier 1
UniProt: P40554
Ligands: MG

Structure

x-ray diffraction · 1 distinct chain · 29% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ubiquitin-related modifier 1	protein	99	29% helix, 33% strand	P40554

Ligands and binding sites

MG · Magnesium ion · metal · 2 copies · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

2QJL · Crystal structure of Urm1 · the same entry in another collection · chain A against A, TM-score 1.00
P40554 · AlphaFold monomer V2.0 prediction for ubiquitin-related modifier 1 (P40554) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P40554
Elsewhere: RCSB PDB 2QJL · PDBe 2QJL · UniProt P40554

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