MolNFT v1 · #49278 · protein

Crystal structure of an aspartoacylase family protein (MLR6093) from mesorhizobium loti MAFF303099 at 2.00 a resolution

2QJ8 · MLR6093 protein: “Crystal structure of an aspartoacylase family protein (MLR6093) from mesorhizobium loti MAFF303099 at 2.00 a…”. X-ray diffraction, 4 pockets (best druggability 0.70). MolNFT v1 #49278 on GenesisL1: 3D structure…

PDB: 2QJ8
Type: protein
Length: 603 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: MLR6093 protein
UniProt: Q98AA0
Pockets: 4 · best druggability 0.70

Structure

x-ray diffraction · 2 distinct chains · 23% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	MLR6093 protein	protein	314	23% helix, 34% strand	Q98AA0
B	MLR6093 protein	protein	289	23% helix, 37% strand	Q98AA0

Pockets

4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	646	0.70	0.78	66	empty
2	299	0.68	0.82	37	empty
3	218	0.55	0.78	32	empty
4	61	0.36	0.78	20	empty

Interfaces

1 interface between chains.

A–B · 1416 Å² buried · 10 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 11 modified (engineered).

Compared structures

2QJ8 · Crystal structure of an aspartoacylase family protein (mlr6093) from mesorhizobium loti… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q98AA0
Elsewhere: RCSB PDB 2QJ8 · PDBe 2QJ8 · UniProt Q98AA0

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