MolNFT v1 · #48819 · protein
Ensemble refinement of the crystal structure of an ef-hand protein from danio rerio DR.36843
2Q4U · Protein ZGC:100843: “Ensemble refinement of the crystal structure of an ef-hand protein from danio rerio DR.36843”. X-ray diffraction, 2 pockets (best druggability 0.60). MolNFT v1 #48819 on GenesisL1: 3D structure, binding sites…
- PDB
- 2Q4U
- Type
- protein
- Length
- 270 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein ZGC:100843
- UniProt
- Q5XJX1
- Pockets
- 2 · best druggability 0.60
Structure
x-ray diffraction · 1 distinct chain · 57% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein ZGC:100843 | protein | 270 | 57% helix, 6% strand | Q5XJX1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 439 | 0.60 | 0.75 | 43 | empty |
| 2 | 61 | 0.26 | 0.73 | 19 | empty |
Modifications
Observed in the structure: 10 modified (engineered).
Compared structures
- 2Q4U · Ensemble refinement of the crystal structure of an EF-hand protein from Danio rerio… · the same entry in another collection · chain A against A, TM-score 1.00
- Q5XJX1 · AlphaFold monomer V2.0 prediction for secretagogin (Q5XJX1) · a predicted model of the same protein · chain A against A, TM-score 0.57
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XJX1
- Elsewhere: RCSB PDB 2Q4U · PDBe 2Q4U · UniProt Q5XJX1
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