MolNFT v1 · #48394 · protein

Crystal structure of thioesterase superfamily protein (ZP_00837258.1) from shewanella loihica pv-4 at 1.65 a resolution

2PRX: “Crystal structure of thioesterase superfamily protein (ZP_00837258.1) from shewanella loihica pv-4 at 1.65 a…”. X-ray diffraction, 3 pockets (best druggability 0.74). MolNFT v1 #48394 on GenesisL1: 3D structure, binding sites and…

PDB: 2PRX
Type: protein
Length: 228 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Thioesterase superfamily protein
UniProt: A3QJH3
Pockets: 3 · best druggability 0.74

Structure

x-ray diffraction · 2 distinct chains · 18% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Thioesterase superfamily protein	protein	114	18% helix, 44% strand	A3QJH3
B	Thioesterase superfamily protein	protein	114	18% helix, 44% strand	A3QJH3

Pockets

3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	352	0.74	0.85	35	empty
2	431	0.71	0.82	38	empty
3	145	0.51	0.79	20	empty

Interfaces

1 interface between chains.

A–B · 931 Å² buried · 17 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

2PRX · Crystal structure of Thioesterase superfamily protein (ZP_00837258.1) from Shewanella… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A3QJH3
Elsewhere: RCSB PDB 2PRX · PDBe 2PRX · UniProt A3QJH3

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