MolNFT v1 · #47984 · protein

Structure of oxidized ohrr from xanthamonas campestris

2PFB · Transcriptional regulator ohrr: “Structure of oxidized ohrr from xanthamonas campestris”. X-ray diffraction, 1 pocket (best druggability 0.28). MolNFT v1 #47984 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2PFB
Type: protein
Length: 252 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcriptional regulator ohrr
UniProt: Q93R11
Pockets: 1 · best druggability 0.28

Structure

x-ray diffraction · 2 distinct chains · 68% helix, 8% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcriptional regulator ohrr	protein	129	69% helix, 8% strand	Q93R11
B	Transcriptional regulator ohrr	protein	123	67% helix, 8% strand	Q93R11

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	57	0.28	0.74	12	empty

Interfaces

1 interface between chains.

A–B · 1887 Å² buried · 23 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

2PFB · Structure of oxidized OhrR from Xanthamonas campestris · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q93R11
Elsewhere: RCSB PDB 2PFB · PDBe 2PFB · UniProt Q93R11

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.