MolNFT v1 · #4791 · protein
Humicola insolens endocellulase CEL7B (eg 1) E197A mutant
1DYM · Endoglucanase I: “Humicola insolens endocellulase CEL7B (eg 1) E197A mutant”. X-ray diffraction, 1 ligand (NAG), 1 pocket (best druggability 0.67). MolNFT v1 #4791 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1DYM
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Endoglucanase I
- EC
- 3.2.1.4
- UniProt
- P56680
- Ligands
- NAG
- Pockets
- 1 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endoglucanase I (EC 3.2.1.4) | protein | 398 | 16% helix, 34% strand | P56680 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 509 | 0.67 | 0.78 | 59 | empty |
Modifications
Observed in the structure: 9 disulfide, 2 glycan, 1 modified (disulfide, N-glycosylation, cyclization).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56680
- Elsewhere: RCSB PDB 1DYM · PDBe 1DYM · UniProt P56680
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