MolNFT v1 · #47478 · protein
Crystal structure of O-succinylbenzoate synthase from thermosynechococcus elongatus bp-1
2OZT · TLR1174 protein: “Crystal structure of O-succinylbenzoate synthase from thermosynechococcus elongatus bp-1”. X-ray diffraction, 2 ligands (NA, PO4), 2 pockets (best druggability 0.76). MolNFT v1 #47478 on GenesisL1: 3D structure…
- PDB
- 2OZT
- Type
- protein
- Length
- 321 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TLR1174 protein
- UniProt
- Q8DJP8
- Ligands
- NA, PO4
- Pockets
- 2 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TLR1174 protein | protein | 321 | 39% helix, 22% strand | Q8DJP8 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 549 | 0.76 | 0.83 | 64 | empty |
| 2 | 109 | 0.40 | 0.76 | 19 | empty |
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 2OZT · Crystal structure of O-succinylbenzoate synthase from Thermosynechococcus elongatus BP-1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DJP8
- Elsewhere: RCSB PDB 2OZT · PDBe 2OZT · UniProt Q8DJP8
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