MolNFT v1 · #47429 · protein

Crystal structure of an unknown conserved protein- pfam: UPF0223

2OY9 · UPF0223 protein BH2638: “Crystal structure of an unknown conserved protein- pfam: UPF0223”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #47429 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2OY9
Type: protein
Length: 167 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: UPF0223 protein BH2638
UniProt: Q9K9K7
Ligands: MG

Structure

x-ray diffraction · 2 distinct chains · 66% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	UPF0223 protein BH2638	protein	85	64% helix, 5% strand	Q9K9K7
B	UPF0223 protein BH2638	protein	82	68% helix, 5% strand	Q9K9K7

Ligands and binding sites

MG · Magnesium ion · metal · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 783 Å² buried · 14 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

2OY9 · Crystal structure of an unknown conserved protein- Pfam: UPF0223 · the same entry in another collection · chain A against A, TM-score 1.00
Q9K9K7 · AlphaFold monomer V2.0 prediction for UPF0223 protein BH2638 (Q9K9K7) · a predicted model of the same protein · chain B against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9K9K7
Elsewhere: RCSB PDB 2OY9 · PDBe 2OY9 · UniProt Q9K9K7

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