MolNFT v1 · #47240 · protein
An alternate description of a crystal structure of phospholipase A2 from bungarus caeruleus
2OSN · Phospholipase A2 isoform 3: “An alternate description of a crystal structure of phospholipase A2 from bungarus caeruleus”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.53). MolNFT v1 #47240 on GenesisL1: 3D…
- PDB
- 2OSN
- Type
- protein
- Length
- 118 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phospholipase A2 isoform 3
- EC
- 3.1.1.4
- UniProt
- Q6SLM0
- Ligands
- CL
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phospholipase A2 isoform 3 (EC 3.1.1.4) | protein | 118 | 46% helix, 8% strand | Q6SLM0 |
Ligands and binding sites
- CL · Chloride ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 157 | 0.53 | 0.80 | 20 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Compared structures
- 2OSN · An alternate description of a crystal structure of phospholipase A2 from Bungarus… · the same entry in another collection · chain A against A, TM-score 1.00
- Q6SLM0 · AlphaFold monomer V2.0 prediction for basic phospholipase A2 3 (Q6SLM0) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6SLM0
- Elsewhere: RCSB PDB 2OSN · PDBe 2OSN · UniProt Q6SLM0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.