MolNFT v1 · #47101 · protein
The crystal structure of gene product SA0254 from staphylocococcus aureus subsp. aureus N315
2OOI · SA0254 protein: “The crystal structure of gene product SA0254 from staphylocococcus aureus subsp. aureus N315”. X-ray diffraction, 1 ligand (ZN), 2 pockets (best druggability 0.71). MolNFT v1 #47101 on GenesisL1: 3D structure…
- PDB
- 2OOI
- Type
- protein
- Length
- 315 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SA0254 protein
- UniProt
- Q7A7U1
- Ligands
- ZN
- Pockets
- 2 · best druggability 0.71
Structure
x-ray diffraction · 2 distinct chains · 20% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SA0254 protein | protein | 157 | 20% helix, 46% strand | Q7A7U1 |
| B | SA0254 protein | protein | 158 | 20% helix, 46% strand | Q7A7U1 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.71 | 0.97 | 22 | ZN |
| 2 | 83 | 0.43 | 0.79 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 1347 Ų buried · 26 hydrogen bonds · protein-protein
Compared structures
- 2OOI · The crystal structure of gene product SA0254 from Staphylocococcus aureus subsp. aureus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7A7U1
- Elsewhere: RCSB PDB 2OOI · PDBe 2OOI · UniProt Q7A7U1
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