MolNFT v1 · #46917 · protein
Xanthomonas xopd C470A mutant
2OIX · Xanthomonas outer protein D: “Xanthomonas xopd C470A mutant”. X-ray diffraction, 2 pockets (best druggability 0.36). MolNFT v1 #46917 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2OIX
- Type
- protein
- Length
- 178 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Xanthomonas outer protein D
- UniProt
- Q3BYJ5
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xanthomonas outer protein D | protein | 178 | 44% helix, 16% strand | Q3BYJ5 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.36 | 0.79 | 17 | empty |
| 2 | 63 | 0.28 | 0.73 | 15 | empty |
Compared structures
- 2OIX · Xanthomonas XopD C470A Mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3BYJ5
- Elsewhere: RCSB PDB 2OIX · PDBe 2OIX · UniProt Q3BYJ5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.