MolNFT v1 · #4687 · DNA
Crystal structure of the 1:1 netropsin-decamer D(CCIICICCII)2 complex with only one drug bound at one end
1DVL · 5'-D(*CP*CP*IP*IP*CP*IP*CP*CP*IP*I)-3': “Crystal structure of the 1:1 netropsin-decamer D(CCIICICCII)2 complex with only one drug bound at one end”. X-ray diffraction, 1 ligand (NT). MolNFT v1 #4687 on GenesisL1: 3D structure…
- PDB
- 1DVL
- Type
- DNA
- Length
- 20 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*CP*CP*IP*IP*CP*IP*CP*CP*IP*I)-3'
- Ligands
- NT
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | 5'-D(*CP*CP*IP*IP*CP*IP*CP*CP*IP*I)-3' | dna | 10 | — | — |
Ligands and binding sites
- NT · Netropsin · ligand · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 441 Ų buried · 49 hydrogen bonds · nucleic-nucleic
Compared structures
- 1DVL · Crystal structure of the 1:1 netropsin-decamer D(CCIICICCII)2 complex with only one drug… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1DVL · PDBe 1DVL
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.