MolNFT v1 · #46580 · protein

Crystal structure of mouse apolipoprotein a-I binding protein

2O8N · Apoa-I binding protein: “Crystal structure of mouse apolipoprotein a-I binding protein”. X-ray diffraction, 2 ligands (SO4, CL), 1 pocket (best druggability 0.69). MolNFT v1 #46580 on GenesisL1: 3D structure, binding sites and…

PDB: 2O8N
Type: protein
Length: 233 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Apoa-I binding protein
UniProt: Q8K4Z3
Ligands: SO4, CL
Pockets: 1 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Apoa-I binding protein	protein	233	38% helix, 16% strand	Q8K4Z3

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	153	0.69	0.89	24	SO4

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

2O8N · Crystal Structure of Mouse Apolipoprotein A-I Binding Protein · the same entry in another collection · chain A against A, TM-score 1.00
Q8K4Z3 · AlphaFold monomer V2.0 prediction for NAD(P)H-hydrate epimerase (Q8K4Z3) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8K4Z3
Elsewhere: RCSB PDB 2O8N · PDBe 2O8N · UniProt Q8K4Z3

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