MolNFT v1 · #4653 · protein

NMR structure of [F5Y, F16W] magainin 2 bound to phospholipid vesicles

1DUM: “NMR structure of [F5Y, F16W] magainin 2 bound to phospholipid vesicles”. Solution nmr. MolNFT v1 #4653 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1DUM
Type: protein
Length: 46 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Magainin 2
UniProt: P11006

Structure

solution nmr · 1 distinct chain · 74% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Magainin 2	protein	23	74% helix, 0% strand	P11006

Interfaces

1 interface between chains.

A–B · 574 Å² buried · 0 hydrogen bonds · protein-protein

Compared structures

1DUM · NMR structure of [F5Y, F16W] magainin 2 bound to phospholipid vesicles · the same entry in another collection · chain A against A, TM-score 1.00
P11006 · AlphaFold monomer V2.0 prediction for magainins (P11006) · a predicted model of the same protein · chain A against A, TM-score 0.35

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P11006
Elsewhere: RCSB PDB 1DUM · PDBe 1DUM · UniProt P11006

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