MolNFT v1 · #46396 · protein
Protein of unknown function (DUF1244) from sinorhizobium meliloti
2O35 · Hypothetical protein DUF1244: “Protein of unknown function (DUF1244) from sinorhizobium meliloti”. X-ray diffraction, 1 ligand (MG), 1 pocket (best druggability 0.34). MolNFT v1 #46396 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2O35
- Type
- protein
- Length
- 174 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein DUF1244
- UniProt
- Q92M60
- Ligands
- MG
- Pockets
- 1 · best druggability 0.34
Structure
x-ray diffraction · 2 distinct chains · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein DUF1244 | protein | 79 | 71% helix, 0% strand | Q92M60 |
| B | Hypothetical protein DUF1244 | protein | 95 | 68% helix, 0% strand | Q92M60 |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.34 | 0.75 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 1653 Ų buried · 11 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 2O35 · Protein of Unknown Function (DUF1244) from Sinorhizobium meliloti · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92M60
- Elsewhere: RCSB PDB 2O35 · PDBe 2O35 · UniProt Q92M60
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