MolNFT v1 · #45798 · protein
Structure of DNA-binding hu protein from micoplasma mycoplasma gallisepticum
2NDP · Histone-like DNA-binding superfamily protein: “Structure of DNA-binding hu protein from micoplasma mycoplasma gallisepticum”. Solution nmr, 1 pocket (best druggability 0.73). MolNFT v1 #45798 on GenesisL1: 3D structure, binding…
- PDB
- 2NDP
- Type
- protein
- Length
- 198 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Histone-like DNA-binding superfamily protein
- UniProt
- A0A0F6CKR5
- Pockets
- 1 · best druggability 0.73
Structure
solution nmr · 1 distinct chain · 36% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Histone-like DNA-binding superfamily protein | protein | 99 | 36% helix, 24% strand | A0A0F6CKR5 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 68 | 0.73 | 0.97 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 2288 Ų buried · 20 hydrogen bonds · protein-protein
Compared structures
- 2NDP · Structure of DNA-binding HU protein from micoplasma Mycoplasma gallisepticum · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0F6CKR5
- Elsewhere: RCSB PDB 2NDP · PDBe 2NDP · UniProt A0A0F6CKR5
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