MolNFT v1 · #45777 · protein
A distinct sortase srtb anchors and processes a streptococcal adhesin abpa with a novel structural property
2ND4 · Amylase-binding protein abpa: “A distinct sortase srtb anchors and processes a streptococcal adhesin abpa with a novel structural property”. Solution nmr, 1 pocket (best druggability 0.28). MolNFT v1 #45777 on GenesisL1: 3D…
- PDB
- 2ND4
- Type
- protein
- Length
- 173 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Amylase-binding protein abpa
- UniProt
- I1ZJ30
- Pockets
- 1 · best druggability 0.28
Structure
solution nmr · 1 distinct chain · 51% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Amylase-binding protein abpa | protein | 173 | 51% helix, 10% strand | I1ZJ30 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 69 | 0.28 | 0.73 | 15 | empty |
Compared structures
- 2ND4 · A distinct sortase SrtB anchors and processes a streptococcal adhesin AbpA with a novel… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I1ZJ30
- Elsewhere: RCSB PDB 2ND4 · PDBe 2ND4 · UniProt I1ZJ30
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