MolNFT v1 · #45723 · protein
Structure of the pscd-region of the cell wall protein pleuralin-1
2NBI · HEP200 protein: “Structure of the pscd-region of the cell wall protein pleuralin-1”. Solution nmr, 9 pockets (best druggability 0.53). MolNFT v1 #45723 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2NBI
- Type
- protein
- Length
- 494 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- HEP200 protein
- UniProt
- O22015
- Pockets
- 9 · best druggability 0.53
Structure
solution nmr · 1 distinct chain · 5% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | HEP200 protein | protein | 494 | 5% helix, 0% strand | O22015 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.53 | 0.81 | 22 | empty |
| 2 | 70 | 0.45 | 0.82 | 15 | empty |
| 3 | 62 | 0.43 | 0.82 | 19 | empty |
| 4 | 92 | 0.40 | 0.77 | 19 | empty |
| 5 | 79 | 0.40 | 0.79 | 18 | empty |
Modifications
Observed in the structure: 25 disulfide (disulfide).
Compared structures
- 2NBI · Structure of the PSCD-region of the cell wall protein pleuralin-1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O22015
- Elsewhere: RCSB PDB 2NBI · PDBe 2NBI · UniProt O22015
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