MolNFT v1 · #4559 · DNA + RNA
DNA/RNA hybrid duplex containing a purine-rich DNA strand, NMR, 10 structures
1DRR · DNA (5'-D(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3'): “DNA/RNA hybrid duplex containing a purine-rich DNA strand, NMR, 10 structures”. Solution nmr. MolNFT v1 #4559 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1DRR
- Type
- DNA + RNA
- Length
- 20 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3'); RNA (5'-R(*GP*CP*UP*UP*CP*UP*CP*UP*UP*C)-3')
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3') | dna | 10 | — | — |
| B | RNA (5'-R(*GP*CP*UP*UP*CP*UP*CP*UP*UP*C)-3') | rna | 10 | — | — |
Interfaces
1 interface between chains.
- A–B · 451 Ų buried · 47 hydrogen bonds · nucleic-nucleic
Compared structures
- 1DRR · DNA/RNA hybrid duplex containing a purine-rich DNA strand, NMR, 10 structures · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1DRR · PDBe 1DRR
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