MolNFT v1 · #4551 · protein
Crystal structure of human dihydrofolate reductase complexed with folate
1DRF: “Crystal structure of human dihydrofolate reductase complexed with folate”. X-ray diffraction, 2 ligands (FOL, SO4), 2 pockets (best druggability 0.72). MolNFT v1 #4551 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1DRF
- Type
- protein
- Length
- 186 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dihydrofolate reductase
- EC
- 1.5.1.3
- UniProt
- P00374
- Ligands
- FOL, SO4
- Pockets
- 2 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dihydrofolate reductase (EC 1.5.1.3) | protein | 186 | 22% helix, 32% strand | P00374 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 322 | 0.72 | 0.85 | 38 | FOL |
| 2 | 50 | 0.26 | 0.74 | 16 | SO4 |
Compared structures
- 1DRF · Crystal structure of human dihydrofolate reductase complexed with folate · the same entry in another collection · chain A against A, TM-score 1.00
- P00374 · AlphaFold monomer V2.0 prediction for dihydrofolate reductase (P00374) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00374
- Elsewhere: RCSB PDB 1DRF · PDBe 1DRF · UniProt P00374
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