MolNFT v1 · #45195 · protein

Structure of the S-glycosylated bacteriocin ASM1

2MVI · Bacteriocin plantarican ASM1: “Structure of the S-glycosylated bacteriocin ASM1”. Solution nmr, 1 ligand (NAG). MolNFT v1 #45195 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2MVI
Type: protein
Length: 43 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bacteriocin plantarican ASM1
UniProt: C7G1H4
Ligands: NAG

Structure

solution nmr · 1 distinct chain · 7% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Bacteriocin plantarican ASM1	protein	43	7% helix, 0% strand	C7G1H4

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide, 2 glycan (disulfide, O-glycosylation, glycosylation).

Compared structures

2MVI · Structure of the S-glycosylated bacteriocin ASM1 · the same entry in another collection · chain A against A, TM-score 1.00
C7G1H4 · AlphaFold monomer V2.0 prediction for bacteriocin plantaricin ASM1 (C7G1H4) · a predicted model of the same protein · chain A against A, TM-score 0.35

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C7G1H4
Elsewhere: RCSB PDB 2MVI · PDBe 2MVI · UniProt C7G1H4

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