MolNFT v1 · #4457 · protein
Solution structure of the monocyte chemoattractant protein-1 dimer using heteronuclear, NMR, minimized average structure
1DOM · Mcp-1: “Solution structure of the monocyte chemoattractant protein-1 dimer using heteronuclear, NMR, minimized…”. Solution nmr. MolNFT v1 #4457 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1DOM
- Type
- protein
- Length
- 152 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mcp-1
- UniProt
- P13500
Structure
solution nmr · 1 distinct chain · 12% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Mcp-1 | protein | 76 | 12% helix, 20% strand | P13500 |
Interfaces
1 interface between chains.
- A–B · 889 Ų buried · 10 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 1DOM · Solution structure of the monocyte chemoattractant protein-1 dimer using heteronuclear… · the same entry in another collection · chain A against A, TM-score 1.00
- P13500 · AlphaFold monomer V2.0 prediction for C-C motif chemokine 2 (P13500) · a predicted model of the same protein · chain B against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P13500
- Elsewhere: RCSB PDB 1DOM · PDBe 1DOM · UniProt P13500
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